Table 2 List of main antimicrobial peptides from transcriptome
AMP families | Accesion number | Identification | ENA Transcript identification | TPM |
|---|---|---|---|---|
Aurein | sp|P69021 | Aurein-3.1 | TRINITY_DN64440_c0_g1_i1 | 256.721 |
Bombesin | sp|P84211 | Bombesin-like peptide | TRINITY_DN48099_c0_g1_i1 | 164.379 |
sp|P84212 | Bombesin-like peptide | TRINITY_DN27392_c0_g1_i1 | 192.298 | |
TRINITY_DN61842_c0_g2_i1 | 106.099 | |||
TRINITY_DN80913_c0_g1_i2 | 102.443 | |||
sp|P84214 | Bombesin | TRINITY_DN71876_c0_g1_i1 | 117.297 | |
sp|P86026 | [Asn3,Lys6,Phe13]3–14-bombesin | TRINITY_DN76333_c0_g1_i1 | 135.698 | |
Bradykinin-like peptide | sp|P84823 | Bradykinin-like peptide | TRINITY_DN71047_c0_g1_i2 | 123.521 |
Brevinin | sp|P32423 | Brevinin-1 | TRINITY_DN70354_c0_g3_i1 | 175.329 |
sp|P82233 | Brevinin-1Ta | TRINITY_DN73322_c2_g2_i1 | 122.993 | |
Buforin | sp|C0HJB7 | Buforin-EC | TRINITY_DN54614_c0_g1_i1 | 766.952 |
TRINITY_DN60267_c0_g1_i1 | 190.875 | |||
TRINITY_DN60267_c1_g1_i1 | 231.457 | |||
TRINITY_DN60267_c0_g2_i1 | 228.282 | |||
Caerin | sp|P69032 | Caerin-2.3 | TRINITY_DN66726_c0_g1_i1 | 182.654 |
TRINITY_DN66726_c0_g1_i2 | 121.242 | |||
Caeridin | sp|P82076 | Caeridin-4 | TRINITY_DN79589_c4_g3_i1 | 226.024 |
Citropin | sp|P81840 | Citropin-1.2 | TRINITY_DN86384_c3_g3_i1 | 111.715 |
Cruzioseptin | sp|C0HK11 | Cruzioseptin-15 | TRINITY_DN70275_c0_g1_i1 | 293.883 |
Dermaseptin | sp|P85523 | Dermaseptin-1 | TRINITY_DN76697_c0_g1_i2 | 115.602 |
Hylambatin | sp|P08614 | Hylambatin | TRINITY_DN87362_c21_g12_i1 | 174.475 |
Hylin | sp|P84003 | Hylin-b2 | TRINITY_DN84946_c0_g1_i2 | 971.000 |
Hyposin | sp|P84957 | Hyposin-HA3 | TRINITY_DN72338_c1_g1_i1 | 616.344 |
Japonicin | sp|P83306 | Japonicin-1 | TRINITY_DN64014_c0_g1_i1 | 310.058 |
Kassinin | sp|P08611 | Kassinin | TRINITY_DN120600_c0_g1_i1 | 346.986 |
TRINITY_DN127618_c2_g1_i1 | 5081.92 | |||
TRINITY_DN52216_c0_g1_i1 | 247.853 | |||
sp|P42988 | Kassinin-like peptide | TRINITY_DN81065_c1_g3_i1 | 130.979 | |
TRINITY_DN87139_c3_g3_i1 | 164.946 | |||
Nigrocin | sp|B3A0M7 | Nigrocin-2JDb | TRINITY_DN87453_c9_g4_i1 | 327.271 |
sp|P0C8U1 | Nigrocin-2HSb | TRINITY_DN85182_c2_g10_i1 | 122.641 | |
TRINITY_DN85182_c2_g3_i1 | 221.000 | |||
Peptide PGLa | sp|C0HKP4 | Peptide PGLa-R6 | TRINITY_DN80328_c3_g2_i1 | 229.068 |
Peroniin | sp|P86487 | Peroniin-1.1 | TRINITY_DN53498_c0_g1_i1 | 279.654 |
sp|P86488 | Peroniin-1.1a | TRINITY_DN67234_c0_g1_i1 | 347.803 | |
sp|P86493 | Peroniin-1.3a | TRINITY_DN81622_c0_g1_i1 | 129.528 | |
sp|P86495 | Peroniin-1.1b | TRINITY_DN46821_c0_g1_i1 | 841.554 | |
Phyllocaerulein | sp|P86625 | [Arg4]-Phyllocaerulein | TRINITY_DN85513_c6_g2_i2 | 280.537 |
Phylloseptin | sp|P84569 | Phylloseptin-4 | TRINITY_DN87185_c0_g1_i2 | 109.815 |
sp|P84931 | Phylloseptin-3 | TRINITY_DN64642_c0_g2_i1 | 168.944 | |
sp|P86283 | Phylloseptin Bu-2 | TRINITY_DN78083_c0_g4_i1 | 389.329 | |
TRINITY_DN78083_c0_g6_i1 | 334.985 | |||
TRINITY_DN78083_c0_g8_i1 | 126.679 | |||
Ranacyclin | sp|P83663 | Ranacyclin-E | TRINITY_DN46765_c0_g1_i1 | 685.023 |
TRINITY_DN81581_c5_g1_i4 | 371.815 | |||
Ranalexin | sp|P82876 | Ranalexin-1Ca | TRINITY_DN110865_c1_g1_i1 | 343.086 |
Ranatensin | sp|P08951 | Ranatensin-C | TRINITY_DN70922_c0_g2_i1 | 116.215 |
Ranauterin | sp|P86020 | Ranatuerin-9 | TRINITY_DN85516_c7_g13_i1 | 111.483 |
Riparin | sp|P86125 | Riparin-1.2 | TRINITY_DN83324_c7_g3_i1 | 215.018 |
TRINITY_DN92795_c0_g1_i1 | 164.545 | |||
sp|P86126 | Riparin-1.3 | TRINITY_DN85374_c2_g1_i1 | 330.835 | |
TRINITY_DN86546_c0_g1_i2 | 264.226 | |||
TRINITY_DN86547_c3_g6_i1 | 130.999 | |||
Rothein | sp|P86510 | Rothein 2.2 | TRINITY_DN87840_c8_g1_i1 | 261.426 |
Rugosin | sp|P08616 | Rugosauperolein-2 | TRINITY_DN87822_c5_g12_i1 | 826.816 |
sp|P84912 | Rugosin A-like peptide | TRINITY_DN82274_c0_g1_i5 | 196.425 | |
TRINITY_DN82274_c0_g1_i6 | 314.015 | |||
Signiferin | sp|P86123 | Signiferin-1 | TRINITY_DN86818_c0_g1_i1 | 140.473 |
Temporin | sp|C0HJB9 | Temporin-ECa | TRINITY_DN86407_c15_g1_i1 | 274.636 |
TRINITY_DN86407_c15_g2_i1 | 915.026 | |||
TRINITY_DN86407_c15_g3_i1 | 478.761 | |||
TRINITY_DN86407_c15_g4_i1 | 527.791 | |||
TRINITY_DN86407_c15_g5_i1 | 256.836 | |||
TRINITY_DN86407_c15_g7_i1 | 176.844 | |||
sp|P0C5X6 | Temporin-1DYa | TRINITY_DN29229_c0_g1_i1 | 133.681 | |
sp|P56917 | Temporin-A | TRINITY_DN13166_c0_g1_i1 | 527.935 | |
TRINITY_DN13166_c0_g2_i1 | 158.363 | |||
sp|P82832 | Temporin-1Lc | TRINITY_DN2695_c0_g1_i1 | 175.444 | |
TRINITY_DN72771_c0_g1_i1 | 105.843 | |||
TRINITY_DN73309_c0_g1_i1 | 140.262 | |||
TRINITY_DN80955_c1_g1_i1 | 254.369 | |||
TRINITY_DN80955_c1_g2_i1 | 387.789 | |||
TRINITY_DN84769_c0_g1_i1 | 373.663 | |||
TRINITY_DN86165_c3_g1_i1 | 155.493 | |||
sp|P82881 | Temporin-1Cb | TRINITY_DN56332_c0_g1_i1 | 105.694 | |
sp|P84858 | Temporin-GH | TRINITY_DN77159_c0_g2_i9 | 102.951 | |
Tigerinin | sp|P82652 | Tigerinin-2 | TRINITY_DN70574_c0_g1_i1 | 242.086 |
TRINITY_DN71694_c0_g1_i1 | 101.217 | |||
TRINITY_DN85395_c7_g6_i1 | 130.962 | |||
sp|C0HL42 | Tigerinin-2OS | TRINITY_DN85615_c2_g3_i2 | 125.931 | |
sp|P82651 | Tigerinin-1OS | TRINITY_DN17276_c0_g1_i1 | 245.073 | |
| Â | Â | TRINITY_DN43562_c0_g1_i1 | 104.073 | |
| Â | Â | TRINITY_DN6203_c0_g1_i1 | 454.682 | |
| Â | Â | TRINITY_DN73092_c0_g1_i1 | 248.482 | |
| Â | Â | TRINITY_DN85479_c6_g29_i1 | 457.183 | |
Uperolein | sp|P08612 | Uperolein | TRINITY_DN111770_c0_g1_i1 | 107.555 |
TRINITY_DN83356_c0_g1_i1 | 424.761 | |||
TRINITY_DN83356_c0_g1_i2 | 339.468 | |||
TRINITY_DN83356_c0_g1_i3 | 101.171 | |||
TRINITY_DN81958_c0_g1_i1 | 277.617 | |||
TRINITY_DN81958_c0_g1_i2 | 216.205 | |||
Uperin | sp|P82036 | Uperin-5.1 | TRINITY_DN87247_c0_g1_i1 | 332.281 |
TRINITY_DN87247_c1_g1_i1 | 137.665 | |||
TRINITY_DN87247_c0_g1_i3 | 185.119 | |||
TRINITY_DN77327_c0_g2_i1 | 238.182 | |||
TRINITY_DN87210_c0_g1_i1 | 105.306 | |||
TRINITY_DN87210_c0_g2_i1 | 132.473 |