Deep sequencing analysis of toad Rhinella schneideri skin glands and partial biochemical characterization of its cutaneous secretion

Shibao, Priscila Yumi Tanaka; Cologna, Camila Takeno; Morandi-Filho, Romualdo; Wiezel, Gisele Adriano; Fujimura, Patricia Tiemi; Ueira-Vieira, Carlos; Arantes, Eliane Candiani

doi:10.1186/s40409-018-0173-8

Journal of Venomous Animals and Toxins including Tropical Diseases

Table 3 List of other peptides and protein of interest from the transcriptome

From: Deep sequencing analysis of toad Rhinella schneideri skin glands and partial biochemical characterization of its cutaneous secretion

Protein class	Accession number	Identification	ENA transcript identification	TPM
Cobatoxin	gb\|DR51150.1	Cobatoxin	TRINITY_DN69643_c0_g1_i1	94.407
Cobatoxin	gb\|AKJ54497.1	Cobatoxin A	TRINITY_DN121110_c0_g1_i1	0.40738
Galectin	gb\|KPJ04718.1	Galectin-4	TRINITY_DN74940_c0_g1_i1	0.372625
	gi\| 847,127,031	Galectin-8	TRINITY_DN78589_c0_g2_i1	149.955
	gi\|768,932,680	Galectin-4-like	TRINITY_DN78656_c0_g1_i1	224.999
	gi\|692,190,428	Galectin 9	TRINITY_DN80231_c0_g1_i1	0.180761
	gi\|692,190,428	Galectin 9	TRINITY_DN80231_c0_g1_i2	0.188734
	gi\|591,365,832	Galectin-9C-like	TRINITY_DN83688_c1_g1_i1	101.232
	gi\|591,365,832	Galectin-9C-like	TRINITY_DN83688_c1_g1_i4	170.619
	gi\|928,062,140	Galectin-4-like	TRINITY_DN83688_c1_g1_i3	0.702454
	gi\|512,835,424	Galectin-12	TRINITY_DN86454_c0_g1_i1	197.028
	gi\|512,835,420	Galectin-12	TRINITY_DN86454_c0_g1_i2	189.779
			TRINITY_DN86454_c0_g1_i3	0.440812
			TRINITY_DN86454_c0_g1_i4	0.561889
	gi\|2,554,855	Galectin A Chain A,	TRINITY_DN92920_c1_g1_i1	672.677
Ficolin	gi\|512,864,759	Ficolin-2-like	TRINITY_DN75601_c0_g1_i1	0.832349
	gi\|530,624,987	Veficolin-1-like	TRINITY_DN81241_c1_g5_i1	369.808
	gi\|611,978,444	Ficolin-2-like	TRINITY_DN85932_c0_g1_i3	104.045
	gi\|512,864,763	Ficolin-2-like	TRINITY_DN86611_c9_g1_i1	932.407
	gi\|148,230,483	Ficolin	TRINITY_DN86611_c9_g2_i1	120.763
	gi\|148,230,483	Ficolin	TRINITY_DN86611_c9_g2_i2	205.043
Phospholipase A₂	gi\|512,862,492	Cytosolic Phospholipase A2 zeta	TRINITY_DN47903_c0_g1_i1	0.447251
	gi\|512,929,364	Group XIIA secretory phospholipase A2	TRINITY_DN86978_c1_g1_i1	0.340838
	gi\|530,606,756	Phospholipase A2, minor isoenzyme-like	TRINITY_DN69641_c0_g1_i1	0.724376
	gi\|657,561,888	Group 10 secretory phospholipase A2-like	TRINITY_DN71078_c0_g1_i1	111.032
	gi\|700,363,984	Cytosolic phospholipase A2 gamma	TRINITY_DN84494_c4_g4_i1	0.294445
	gi\|700,363,984	Cytosolic phospholipase A2 gamma	TRINITY_DN84494_c4_g5_i1	0.141515
	gi\|847,119,410	85/88 kDa calcium-independent phospholipase A2	TRINITY_DN79625_c2_g1_i1	0.48039
	gi\|847,119,410	85/88 kDa calcium-independent phospholipase A2	TRINITY_DN79625_c2_g1_i2	0.508773
	gi\|884,758,924	Cytosolic phospholipase A2 gamma	TRINITY_DN60871_c0_g1_i1	0.0554201
			TRINITY_DN60871_c0_g2_i1	0.273762
			TRINITY_DN60871_c0_g3_i1	0.081637
			TRINITY_DN60871_c0_g4_i1	0.278435
	gi\|512,862,492	Cytosolic phospholipase A2 zeta	TRINITY_DN54445_c0_g1_i1	162.823
	gi\|148,223,595	Cytosolic phospholipase A2	TRINITY_DN71015_c0_g1_i1	107.048
	gi\|148,223,595	Cytosolic phospholipase A2	TRINITY_DN71015_c0_g2_i1	0.0297482
	gi\|48,429,036	Phospholipase A2 crotoxin basic subunit CBc	TRINITY_DN72825_c0_g1_i1	320.644
	gi\|129,456	Phospholipase A2 homolog crotoxin acid subunit CA	TRINITY_DN72825_c0_g2_i1	388.741
	gi\|512,834,221	Group XV phospholipase A2 isoform X2	TRINITY_DN74674_c0_g1_i1	202.101
	gi\|163,916,015	Phospholipase A2, group XIIA	TRINITY_DN74706_c0_g1_i1	250.869
Metallo proteases	gi\|148,222,675	Disintegrin and metalloproteinase domain-containing protein 22 precursor	TRINITY_DN11900_c0_g1_i1	0.414536
Serine proteases	gb\|ACI32835.1	Serine proteinase-like protein 1	TRINITY_DN79566_c0_g1_i1	0.486137
	gi\|913,306,165	Serine proteinase stubble	TRINITY_DN86427_c0_g1_i1	0.326702
	gb\|ACI32835.1	Serine proteinase-like protein 1	TRINITY_DN87507_c0_g1_i1	17.516
			TRINITY_DN87507_c0_g1_i3	126.092
			TRINITY_DN87507_c0_g1_i4	156.004
			TRINITY_DN87507_c0_g1_i5	0.772103
	gi\|380,875,411	Thrombin-like Enzyme gyroxin B1.4	TRINITY_DN87578_c1_g1_i2	0.172693
			TRINITY_DN87578_c1_g1_i5	0.125578
			TRINITY_DN87578_c1_g1_i6	0.658672
	gb\|AEJ32000.1	Serine proteinase 6	TRINITY_DN87578_c1_g1_i3	0.266027
			TRINITY_DN87578_c1_g1_i4	0.246148
			TRINITY_DN87578_c1_g1_i8	0.29959
	gi\|827,563,139	Serine proteinase-like protein isoform X1	TRINITY_DN87890_c1_g6_i3	0.193263
	gb\|AAM69353.1	Serine proteinase-like protein 2	TRINITY_DN87890_c1_g6_i5	0.508857

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ISSN: 1678-9199

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